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  5. Lsat_1_v5_gn_6_24480.1

Lsat_1_v5_gn_6_24480.1


Description : E3 ubiquitin ligase


Gene families : OG0009400 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_6_24480.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_5


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006405 RNA export from nucleus IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006406 mRNA export from nucleus IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006913 nucleocytoplasmic transport IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0008541 proteasome regulatory particle, lid subcomplex IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0015931 nucleobase-containing compound transport IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0016043 cellular component organization IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0022607 cellular component assembly IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0032991 protein-containing complex IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0043248 proteasome assembly IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0043933 protein-containing complex organization IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0046907 intracellular transport IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0050657 nucleic acid transport IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0050658 RNA transport IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0051028 mRNA transport IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0051168 nuclear export IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0051169 nuclear transport IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0051236 establishment of RNA localization IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0051641 cellular localization IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0051649 establishment of localization in cell IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0065003 protein-containing complex assembly IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0071702 organic substance transport IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0071705 nitrogen compound transport IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0071840 cellular component organization or biogenesis IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR001841 Znf_RING 164 210
No external refs found!