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Description : RNA editing factor *(SLO1)
Gene families : OG0039493 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_6_17820.1 | |
| Cluster | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_104 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0005488 | binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006298 | mismatch repair | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0008270 | zinc ion binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0015276 | ligand-gated monoatomic ion channel activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0022834 | ligand-gated channel activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0031072 | heat shock protein binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0043167 | ion binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0043169 | cation binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0046872 | metal ion binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0046914 | transition metal ion binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0051082 | unfolded protein binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR046849 | Eplus_motif | 624 | 647 |
| IPR002885 | Pentatricopeptide_rpt | 305 | 332 |
| IPR046848 | E_motif | 556 | 618 |
| IPR002885 | Pentatricopeptide_rpt | 108 | 137 |
| IPR002885 | Pentatricopeptide_rpt | 514 | 538 |
| IPR002885 | Pentatricopeptide_rpt | 335 | 382 |
| IPR002885 | Pentatricopeptide_rpt | 203 | 250 |
| IPR002885 | Pentatricopeptide_rpt | 437 | 486 |
| No external refs found! |