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  5. Lsat_1_v5_gn_6_115140.1

Lsat_1_v5_gn_6_115140.1


Description : not classified


Gene families : OG0015564 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_6_115140.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_168


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004126 cytidine deaminase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004843 cysteine-type deubiquitinase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006213 pyrimidine nucleoside metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006216 cytidine catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008270 zinc ion binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009056 catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009057 macromolecule catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009116 nucleoside metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009119 ribonucleoside metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009164 nucleoside catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009972 cytidine deamination IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016787 hydrolase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0019239 deaminase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0019439 aromatic compound catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0019783 ubiquitin-like protein peptidase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0019842 vitamin binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0019941 modification-dependent protein catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0030170 pyridoxal phosphate binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0034655 nucleobase-containing compound catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0034656 nucleobase-containing small molecule catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0035556 intracellular signal transduction IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0042454 ribonucleoside catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0044248 cellular catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0044270 cellular nitrogen compound catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0044282 small molecule catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0046087 cytidine metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0046131 pyrimidine ribonucleoside metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0046133 pyrimidine ribonucleoside catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0046135 pyrimidine nucleoside catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0046700 heterocycle catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0051603 proteolysis involved in protein catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0070279 vitamin B6 binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0072529 pyrimidine-containing compound catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0101005 deubiquitinase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:1901136 carbohydrate derivative catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:1901361 organic cyclic compound catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:1901565 organonitrogen compound catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:1901575 organic substance catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:1901657 glycosyl compound metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:1901658 glycosyl compound catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR046431 FAF_dom 5 56
No external refs found!