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Description : not classified
Gene families : OG0002949 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0002949_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Brassica rapa (Bra) PCC: Bra006504 | |
| Cluster | Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_157 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0046872 | metal ion binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005215 | transporter activity | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0005991 | trehalose metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0005992 | trehalose biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006890 | retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0007062 | sister chromatid cohesion | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0007064 | mitotic sister chromatid cohesion | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0009312 | oligosaccharide biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0009439 | cyanate metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0009719 | response to endogenous stimulus | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0009725 | response to hormone | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0010033 | response to organic substance | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0022402 | cell cycle process | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0022857 | transmembrane transporter activity | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0042221 | response to chemical | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0046351 | disaccharide biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0048193 | Golgi vesicle transport | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0051276 | chromosome organization | IEP | Brassica rapa GO terms from Neighborhoods |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR027988 | BRX_N | 913 | 947 |
| IPR013591 | Brevis_radix_dom | 1028 | 1083 |
| IPR000306 | Znf_FYVE | 656 | 722 |
| IPR000408 | Reg_chr_condens | 605 | 652 |
| IPR000408 | Reg_chr_condens | 382 | 432 |
| IPR000408 | Reg_chr_condens | 499 | 548 |
| IPR000408 | Reg_chr_condens | 331 | 379 |
| IPR000408 | Reg_chr_condens | 436 | 484 |
| IPR000408 | Reg_chr_condens | 551 | 600 |
| IPR001849 | PH_domain | 23 | 129 |
| No external refs found! |