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  5. Lsat_1_v5_gn_6_110360.1

Lsat_1_v5_gn_6_110360.1 (AtFAD2, FAD2)


Aliases : AtFAD2, FAD2

Description : delta-12/delta-15 fatty acid desaturase


Gene families : OG0005268 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0005268_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_6_110360.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_73

Target Alias Description ECC score Gene Family Method Actions
Lsat_1_v5_gn_6_109980.1 AtFAD2, FAD2 delta-12/delta-15 fatty acid desaturase 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEA Interproscan
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004852 uroporphyrinogen-III synthase activity IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0005730 nucleolus IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0009055 electron transfer activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009772 photosynthetic electron transport in photosystem II IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0015095 magnesium ion transmembrane transporter activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0015693 magnesium ion transport IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016209 antioxidant activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0033013 tetrapyrrole metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0033014 tetrapyrrole biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0034357 photosynthetic membrane IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0042254 ribosome biogenesis IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0042651 thylakoid membrane IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0044085 cellular component biogenesis IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR005804 FA_desaturase_dom 86 346
IPR021863 FAS_N 18 66
No external refs found!