Aliases : PPD5
Description : regulatory protein *(BDR) involved in RNA polymerase-II transcription
Gene families : OG0009417 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_6_10880.1 | |
Cluster | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_203 |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005509 | calcium ion binding | IEA | Interproscan |
BP | GO:0006351 | DNA-templated transcription | IEA | Interproscan |
CC | GO:0009523 | photosystem II | IEA | Interproscan |
CC | GO:0009654 | photosystem II oxygen evolving complex | IEA | Interproscan |
BP | GO:0015979 | photosynthesis | IEA | Interproscan |
CC | GO:0019898 | extrinsic component of membrane | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0001522 | pseudouridine synthesis | IEP | Lactuca Sativa GO terms from Neighborhoods |
MF | GO:0003676 | nucleic acid binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
MF | GO:0003723 | RNA binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
MF | GO:0005525 | GTP binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
BP | GO:0006325 | chromatin organization | IEP | Lactuca Sativa GO terms from Neighborhoods |
BP | GO:0006338 | chromatin remodeling | IEP | Lactuca Sativa GO terms from Neighborhoods |
MF | GO:0008483 | transaminase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
BP | GO:0009451 | RNA modification | IEP | Lactuca Sativa GO terms from Neighborhoods |
MF | GO:0009982 | pseudouridine synthase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
BP | GO:0010024 | phytochromobilin biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
MF | GO:0016409 | palmitoyltransferase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
MF | GO:0016627 | oxidoreductase activity, acting on the CH-CH group of donors | IEP | Lactuca Sativa GO terms from Neighborhoods |
MF | GO:0016636 | oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor | IEP | Lactuca Sativa GO terms from Neighborhoods |
MF | GO:0016769 | transferase activity, transferring nitrogenous groups | IEP | Lactuca Sativa GO terms from Neighborhoods |
MF | GO:0016866 | intramolecular transferase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
MF | GO:0019001 | guanyl nucleotide binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
MF | GO:0019842 | vitamin binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
MF | GO:0030170 | pyridoxal phosphate binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
MF | GO:0032561 | guanyl ribonucleotide binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
BP | GO:0033013 | tetrapyrrole metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
BP | GO:0033014 | tetrapyrrole biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
MF | GO:0036094 | small molecule binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
MF | GO:0043168 | anion binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
BP | GO:0043648 | dicarboxylic acid metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
BP | GO:0043650 | dicarboxylic acid biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
MF | GO:0050897 | cobalt ion binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
BP | GO:0051202 | phytochromobilin metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
MF | GO:0070279 | vitamin B6 binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
BP | GO:0071824 | protein-DNA complex organization | IEP | Lactuca Sativa GO terms from Neighborhoods |
MF | GO:0097159 | organic cyclic compound binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
BP | GO:0140673 | transcription elongation-coupled chromatin remodeling | IEP | Lactuca Sativa GO terms from Neighborhoods |
MF | GO:1901363 | heterocyclic compound binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
No external refs found! |