Lsat_1_v5_gn_6_10680.1 (GRF7, AtGRF7)

Aliases : GRF7, AtGRF7

Description : component *(GRF) of GRF-GIF transcriptional complex

Gene families : OG0039350 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_6_10680.1
Cluster	Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_61

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000295	adenine nucleotide transmembrane transporter activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0001510	RNA methylation	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0005346	purine ribonucleotide transmembrane transporter activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0005347	ATP transmembrane transporter activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0005471	ATP:ADP antiporter activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006400	tRNA modification	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006862	nucleotide transport	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0008033	tRNA processing	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0008168	methyltransferase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0008173	RNA methyltransferase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0008175	tRNA methyltransferase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0008285	negative regulation of cell population proliferation	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0008514	organic anion transmembrane transporter activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0015215	nucleotide transmembrane transporter activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0015216	purine nucleotide transmembrane transporter activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0015217	ADP transmembrane transporter activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0015605	organophosphate ester transmembrane transporter activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0015748	organophosphate ester transport	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0015931	nucleobase-containing compound transport	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0015932	nucleobase-containing compound transmembrane transporter activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016426	tRNA (adenine) methyltransferase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016429	tRNA (adenine-N1-)-methyltransferase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016627	oxidoreductase activity, acting on the CH-CH group of donors	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016741	transferase activity, transferring one-carbon groups	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0030488	tRNA methylation	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0031515	tRNA (m1A) methyltransferase complex	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0032259	methylation	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0034708	methyltransferase complex	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0042127	regulation of cell population proliferation	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0043414	macromolecule methylation	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0043527	tRNA methyltransferase complex	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0048519	negative regulation of biological process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0048523	negative regulation of cellular process	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:1901505	carbohydrate derivative transmembrane transporter activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:1901702	salt transmembrane transporter activity	IEP	Lactuca Sativa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR014978	Gln-Leu-Gln_QLQ	36	69
IPR014977	WRC_dom	95	137

External Links

No external refs found!

Lsat_1_v5_gn_6_10680.1 (GRF7, AtGRF7)

Expression Profile

Co-expression Networks

Functional Annotation