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Aliases : ZFHD2, ATHB25, HB25, ZHD1
Description : zf-HD-type transcription factor
Gene families : OG0038837 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_6_105160.1 | |
| Cluster | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_118 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0000184 | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0000956 | nuclear-transcribed mRNA catabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0003677 | DNA binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0003724 | RNA helicase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0003774 | cytoskeletal motor activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0003777 | microtubule motor activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0005096 | GTPase activator activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0005488 | binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0005515 | protein binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0005524 | ATP binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0005634 | nucleus | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0005856 | cytoskeleton | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0005885 | Arp2/3 protein complex | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006401 | RNA catabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006402 | mRNA catabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0007015 | actin filament organization | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0007017 | microtubule-based process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0007018 | microtubule-based movement | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0008017 | microtubule binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0008092 | cytoskeletal protein binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0008186 | ATP-dependent activity, acting on RNA | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0009982 | pseudouridine synthase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0010468 | regulation of gene expression | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0010629 | negative regulation of gene expression | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0015629 | actin cytoskeleton | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0015631 | tubulin binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0016051 | carbohydrate biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0017076 | purine nucleotide binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0019222 | regulation of metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0030151 | molybdenum ion binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0032553 | ribonucleotide binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0034314 | Arp2/3 complex-mediated actin nucleation | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0034655 | nucleobase-containing compound catabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0036094 | small molecule binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0043167 | ion binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0043168 | anion binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0043227 | membrane-bounded organelle | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0045010 | actin nucleation | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0097435 | supramolecular fiber organization | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0140657 | ATP-dependent activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR006456 | ZF_HD_homeobox_Cys/His_dimer | 44 | 96 |
| No external refs found! |