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  5. Lsat_1_v5_gn_6_1020.1

Lsat_1_v5_gn_6_1020.1 (EMB3102, OTP82)


Aliases : EMB3102, OTP82

Description : not classified


Gene families : OG0017404 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_6_1020.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_145


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004176 ATP-dependent peptidase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004527 exonuclease activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004784 superoxide dismutase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006413 translational initiation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006801 superoxide metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006820 monoatomic anion transport IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0009579 thylakoid IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016209 antioxidant activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0048038 quinone binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0072593 reactive oxygen species metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_rpt 108 133
IPR002885 Pentatricopeptide_rpt 216 239
IPR002885 Pentatricopeptide_rpt 137 185
IPR002885 Pentatricopeptide_rpt 272 319
IPR002885 Pentatricopeptide_rpt 1 40
No external refs found!