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  5. Lsat_1_v5_gn_5_94840.1

Lsat_1_v5_gn_5_94840.1


Description : not classified


Gene families : OG0001293 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0001293_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_5_94840.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_10

Target Alias Description ECC score Gene Family Method Actions
Lsat_1_v5_gn_8_118300.1 GCN1, NOXY7, ILA not classified 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm IEA Interproscan
BP GO:0120009 intermembrane lipid transfer IEA Interproscan
MF GO:0120013 lipid transfer activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004827 proline-tRNA ligase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006433 prolyl-tRNA aminoacylation IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR014830 Glycolipid_transfer_prot_dom 87 127
IPR024601 Peptidase_M1_pepN_C 150 185
No external refs found!