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  5. Lsat_1_v5_gn_5_8861.1

Lsat_1_v5_gn_5_8861.1


Description : not classified


Gene families : OG0008858 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_5_8861.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_7


Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004559 alpha-mannosidase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004842 ubiquitin-protein transferase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0005996 monosaccharide metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006013 mannose metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0015923 mannosidase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016755 aminoacyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0019318 hexose metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0019787 ubiquitin-like protein transferase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0061630 ubiquitin protein ligase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0061659 ubiquitin-like protein ligase activity IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 157 216
IPR001611 Leu-rich_rpt 472 532
IPR001611 Leu-rich_rpt 308 363
IPR001611 Leu-rich_rpt 400 420
IPR001611 Leu-rich_rpt 449 463
IPR001611 Leu-rich_rpt 230 252
IPR001611 Leu-rich_rpt 376 396
IPR001611 Leu-rich_rpt 255 275
No external refs found!