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Aliases : CSU1
Description : regulatory E3 ubiquitin ligase *(CSU1) of COP1 activity
Gene families : OG0046349 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_5_78441.1 | |
| Cluster | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_18 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0000502 | proteasome complex | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0004519 | endonuclease activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0005681 | spliceosomal complex | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0005839 | proteasome core complex | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006308 | DNA catabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006396 | RNA processing | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006397 | mRNA processing | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0008380 | RNA splicing | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0009056 | catabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0009057 | macromolecule catabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0009894 | regulation of catabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0016070 | RNA metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0016071 | mRNA metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0019439 | aromatic compound catabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0019773 | proteasome core complex, alpha-subunit complex | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0019941 | modification-dependent protein catabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0032991 | protein-containing complex | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0034655 | nucleobase-containing compound catabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0042176 | regulation of protein catabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0044248 | cellular catabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0044270 | cellular nitrogen compound catabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0046700 | heterocycle catabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0051246 | regulation of protein metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0061630 | ubiquitin protein ligase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0061659 | ubiquitin-like protein ligase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0140535 | intracellular protein-containing complex | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0140658 | ATP-dependent chromatin remodeler activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:1901361 | organic cyclic compound catabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:1901575 | organic substance catabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:1902494 | catalytic complex | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:1905368 | peptidase complex | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:1905369 | endopeptidase complex | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | Lactuca Sativa GO terms from Neighborhoods |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR031790 | Znf-NOSIP | 5 | 75 |
| No external refs found! |