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  5. Lsat_1_v5_gn_5_73280.1

Lsat_1_v5_gn_5_73280.1 (ATWRKY36, WRKY36)


Aliases : ATWRKY36, WRKY36

Description : EC_3.4 hydrolase acting on peptide bond (peptidase). M10-class (Matrixin) metalloprotease


Gene families : OG0001297 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0001297_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_5_73280.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_35

Target Alias Description ECC score Gene Family Method Actions
Lsat_1_v5_gn_3_125940.1 MAA3 EC_3.4 hydrolase acting on peptide bond (peptidase).... 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEA Interproscan
BP GO:0006508 proteolysis IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
CC GO:0031012 extracellular matrix IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0030246 carbohydrate binding IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR001818 Pept_M10_metallopeptidase 177 326
IPR002477 Peptidoglycan-bd-like 82 142
No external refs found!