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Description : CWF19-type post-transcriptionally regulatory factor
Gene families : OG0046989 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_5_72980.1 | |
| Cluster | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_68 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0004176 | ATP-dependent peptidase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0004252 | serine-type endopeptidase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0004813 | alanine-tRNA ligase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0005984 | disaccharide metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0005991 | trehalose metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0005992 | trehalose biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006354 | DNA-templated transcription elongation | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006368 | transcription elongation by RNA polymerase II | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006397 | mRNA processing | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006419 | alanyl-tRNA aminoacylation | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0008023 | transcription elongation factor complex | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0008152 | metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0008380 | RNA splicing | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0008641 | ubiquitin-like modifier activating enzyme activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0009311 | oligosaccharide metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0009312 | oligosaccharide biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0016070 | RNA metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0016071 | mRNA metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0016570 | histone modification | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0016593 | Cdc73/Paf1 complex | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0016874 | ligase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0016877 | ligase activity, forming carbon-sulfur bonds | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0019781 | NEDD8 activating enzyme activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0019899 | enzyme binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0019941 | modification-dependent protein catabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0031625 | ubiquitin protein ligase binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0043687 | post-translational protein modification | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0044238 | primary metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0044389 | ubiquitin-like protein ligase binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0045116 | protein neddylation | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0046351 | disaccharide biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0071704 | organic substance metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| No external refs found! |