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  5. Lsat_1_v5_gn_5_67920.1

Lsat_1_v5_gn_5_67920.1 (PPR30)


Aliases : PPR30

Description : not classified


Gene families : OG0046425 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_5_67920.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_104


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0031072 heat shock protein binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0043167 ion binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0043169 cation binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0046872 metal ion binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0046914 transition metal ion binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0051082 unfolded protein binding IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_rpt 450 472
IPR002885 Pentatricopeptide_rpt 277 302
IPR002885 Pentatricopeptide_rpt 1 26
IPR002885 Pentatricopeptide_rpt 486 514
IPR002885 Pentatricopeptide_rpt 102 132
IPR002885 Pentatricopeptide_rpt 31 60
IPR002885 Pentatricopeptide_rpt 520 549
IPR002885 Pentatricopeptide_rpt 381 425
IPR002885 Pentatricopeptide_rpt 204 247
IPR002885 Pentatricopeptide_rpt 553 594
IPR002885 Pentatricopeptide_rpt 135 180
IPR002885 Pentatricopeptide_rpt 308 355
No external refs found!