1. Home
  2. Species
  3. Lactuca sativa
  4. Sequence
  5. Lsat_1_v5_gn_5_56541.1

Lsat_1_v5_gn_5_56541.1


Description : not classified


Gene families : OG0045103 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_5_56541.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_18


Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0000398 mRNA splicing, via spliceosome IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004843 cysteine-type deubiquitinase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0005515 protein binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0005516 calmodulin binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0005525 GTP binding IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0005681 spliceosomal complex IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006099 tricarboxylic acid cycle IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006367 transcription initiation at RNA polymerase II promoter IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008312 7S RNA binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009891 positive regulation of biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009893 positive regulation of metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0009916 alternative oxidase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0010038 response to metal ion IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0010604 positive regulation of macromolecule metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0016579 protein deubiquitination IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016755 aminoacyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016756 glutathione gamma-glutamylcysteinyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0019001 guanyl nucleotide binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0019748 secondary metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0019783 ubiquitin-like protein peptidase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0031325 positive regulation of cellular metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0031328 positive regulation of cellular biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0032182 ubiquitin-like protein binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0032561 guanyl ribonucleotide binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0032784 regulation of DNA-templated transcription elongation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0032786 positive regulation of DNA-templated transcription, elongation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0032968 positive regulation of transcription elongation by RNA polymerase II IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0034243 regulation of transcription elongation by RNA polymerase II IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0043130 ubiquitin binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0043687 post-translational protein modification IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0044550 secondary metabolite biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0045893 positive regulation of DNA-templated transcription IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0045935 positive regulation of nucleobase-containing compound metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0045944 positive regulation of transcription by RNA polymerase II IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0046912 acyltransferase activity, acyl groups converted into alkyl on transfer IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0046937 phytochelatin metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0046938 phytochelatin biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0048500 signal recognition particle IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0048522 positive regulation of cellular process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0051254 positive regulation of RNA metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0070646 protein modification by small protein removal IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0070647 protein modification by small protein conjugation or removal IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0101005 deubiquitinase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:1902680 positive regulation of RNA biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:1990904 ribonucleoprotein complex IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR012866 DUF1644 11 161
No external refs found!