Lsat_1_v5_gn_5_53160.1 (ATMYB3R5, MYB3R-5)

Aliases : ATMYB3R5, MYB3R-5

Description : assembly factor CRR42 involved in NDH complex assembly

Gene families : OG0009168 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_5_53160.1
Cluster	Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_39

Type	GO Term	Name	Evidence	Source
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010257	NADH dehydrogenase complex assembly	None	Extended
BP	GO:0010258	NADH dehydrogenase complex (plastoquinone) assembly	IEA	Interproscan
BP	GO:0010275	NAD(P)H dehydrogenase complex assembly	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0022607	cellular component assembly	None	Extended
BP	GO:0043933	protein-containing complex organization	None	Extended
BP	GO:0065003	protein-containing complex assembly	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003872	6-phosphofructokinase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0004674	protein serine/threonine kinase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0005886	plasma membrane	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006090	pyruvate metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006096	glycolytic process	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0008443	phosphofructokinase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0009579	thylakoid	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0010333	terpene synthase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0016052	carbohydrate catabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016838	carbon-oxygen lyase activity, acting on phosphates	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0019200	carbohydrate kinase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0042393	histone binding	IEP	Lactuca Sativa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR021495	CRR42-like	53	88

External Links

No external refs found!