Lsat_1_v5_gn_5_41081.1 (LMK1)

Aliases : LMK1

Description : not classified

Gene families : OG0000236 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000236_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_5_41081.1
Cluster	Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_78

Target	Alias	Description	ECC score	Gene Family Method	Actions
Lsat_1_v5_gn_0_16821.1	LRX9	not classified	0.03	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004864	protein phosphatase inhibitor activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0010921	regulation of phosphatase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016872	intramolecular lyase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0019212	phosphatase inhibitor activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0020037	heme binding	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0030163	protein catabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0035303	regulation of dephosphorylation	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0035304	regulation of protein dephosphorylation	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0043666	regulation of phosphoprotein phosphatase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0051336	regulation of hydrolase activity	IEP	Lactuca Sativa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR001878	Znf_CCHC	274	289

External Links

No external refs found!