Heatmap: Cluster_78 (Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log₂ transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene	Light: 268 uE m-2 s-1	Light: 202.5 uE m-2 s-1 (Control)	Light: 135 uE m-2 s-1	Light: 67.5 uE m-2 s-1	Photoperiod: L24	Photoperiod: L20D4 (Control)	Photoperiod: L12D12	Photoperiod: L8D16	RBW: 4:1:1 (Control)	RBW: 4:1:0	RBW: 3:1:1	RBW: 3:1:0	Nitrogen: 0%	Nitrogen: 25%	Nitrogen: 50%	Nitrogen: 100% (Control)	Nitrogen: 150%	Phosphorous: 0%	Phosphorous: 25%	Phosphorous: 50%	Phosphorous: 100% (Control)	Phosphorous: 150%	Potassium: 0%	Potassium: 25%	Potassium: 50%	Potassium: 100% (Control)	Potassium: 150%	Temperature: 20°C	Temperature: 25°C (Control)	Temperature: 30°C	Temperature: 35°C
Lsat_1_v5_gn_0_7441.1 (PDR11)	-	-	-	-	-	-	-	-	-	-	-	-	-	-	4.68	-	-	1.42	-	-	-	-	-	1.43	-	-	-	-	-	-	-
Lsat_1_v5_gn_1_115321.1 (REC2)	-	-	-	-	-	-	-	-	-	-	-	-	-	-	4.33	-	-	-	-	-	-	-	-	-	3.44	-	-	-	-	-	-
Lsat_1_v5_gn_1_118421.1 (PEN3)	-	-	-	-	-	-	-	-	-	-	-	-	-	4.0	3.02	-	-	-	2.79	-	-	-	-	-	-	-	-	-	-	-	-
Lsat_1_v5_gn_1_120721.1 (TCP10)	-	-	-	-	-	-	-	-	-	-	-	-	-	-	4.06	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	3.84
Lsat_1_v5_gn_1_13840.1 (ESL3.03)	-	-	-	-	-	-	-	-	-	-	-	-	-	-	4.24	-	-	-	-	-	-	-	3.59	-	-	-	-	-	-	-	-
Lsat_1_v5_gn_1_14620.1 (IRX6)	-0.45	-	1.06	-	0.17	0.68	0.21	-	-0.06	-	-	-0.87	1.54	2.53	2.31	1.62	-	-	0.08	-	-	-	-	-	-	-	-	-	1.13	1.04	-0.39
Lsat_1_v5_gn_1_19301.1	-2.67	0.33	-	-	-0.45	-1.97	-1.78	-1.14	-0.53	-3.57	-1.21	-1.67	-0.75	2.93	1.54	-1.57	-3.45	2.59	-0.24	-	-1.02	-	1.65	-3.28	-0.14	-1.8	-1.03	-1.23	-1.16	-0.75	0.06
Lsat_1_v5_gn_1_20761.1 (PLP2)	-1.72	-4.78	-5.11	-7.46	1.95	0.99	-4.09	-5.37	-3.34	-3.27	-2.55	-2.64	-1.99	3.15	3.45	-2.88	-3.55	-2.03	-0.37	-3.7	-1.86	-1.98	-0.81	-2.39	-2.01	-1.41	-1.39	-1.28	-4.87	-5.0	-
Lsat_1_v5_gn_1_29981.1 (CNX1)	-2.72	-	-	-1.77	1.69	1.18	-	-	-1.33	-3.23	-	-2.96	1.14	3.29	3.0	-2.7	-2.95	0.68	-3.19	-	-2.31	-	-2.02	-	-	-1.85	-2.98	-0.13	-2.12	-1.13	-
Lsat_1_v5_gn_1_31441.1	-	-	-	-	0.72	1.4	-	0.03	-0.29	-0.24	0.92	-	0.07	2.61	3.17	-0.04	-	1.32	1.35	-	-	-	-	-	-	-	-	-	-	-	-
Lsat_1_v5_gn_1_78900.1 (SRK2B)	-	-	-	-	-	-	-	-	-	-	-	-	-	-	4.95	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Lsat_1_v5_gn_1_80760.1	-	-	-	-	-	1.39	-	-	-	-	-	1.55	-	2.72	3.4	-	-	1.5	-	-	-	-	-	-	-	1.38	-	-	1.54	-	-
Lsat_1_v5_gn_1_81681.1	-	-	-	-	-	-	-	-	-	-	-	-	-	2.55	3.48	-	-	1.2	-	-	-	-	2.28	-	-	-	1.07	-	-	-	2.23
Lsat_1_v5_gn_1_85880.1	-	-	-	-	-	-	-	-	-	-	-	-	-	-	4.95	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Lsat_1_v5_gn_1_96360.1	-	-	-	-	-	-	-	-	-	-	-	-	-	-	4.95	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Lsat_1_v5_gn_2_57520.1	-1.69	-2.93	-	-	0.9	0.06	-4.09	-4.03	-2.67	-2.86	-2.91	-2.9	-3.17	3.57	3.16	-1.27	-2.42	-0.43	-0.33	-2.01	-1.59	-2.66	0.36	-2.07	-1.84	-3.21	-1.57	-2.1	-2.27	-1.43	-2.69
Lsat_1_v5_gn_2_82300.1 (LecRK-IX.2)	-	-	-	-	-	-	-	-	-	-	-	-	-	-	4.95	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Lsat_1_v5_gn_3_21180.1 (ATL67)	-	-	-	-	-	-	-	-	-	-	-	-	-	-	4.95	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Lsat_1_v5_gn_3_5860.1	-	-	-	-	-	-	-	-	-	-	-	-	-	-	4.95	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Lsat_1_v5_gn_3_8821.1	-	-	-	-	-	-	-	-	-	-	-	-	-	-	4.95	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Lsat_1_v5_gn_4_115641.1 (UNH)	-	-	-	-	-	-	-	-	-	-	-	-	-	-	4.95	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Lsat_1_v5_gn_4_118940.1	-	-	-	-	2.78	-	-	-	-	-	-	-	-	3.39	2.46	-	-	-	-	-	-	-	-	-	-	1.85	-	-	2.18	-	-
Lsat_1_v5_gn_4_129001.1 (EFR)	-0.48	-	-	-	0.9	-	-	-	-	-	-	-	-	2.37	4.06	-	-	2.32	-	-	-	-	-	-	-	-	-	-	-0.28	-0.34	-
Lsat_1_v5_gn_4_130641.1 (SAC3B)	-	-	-	-	-	-	-	-	-	-	-	-17.6	-	-	4.95	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Lsat_1_v5_gn_4_162021.1 (INO80)	-	-	-	-	-	-	-	-	-	-	-	-	-	-	4.95	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Lsat_1_v5_gn_4_164120.1 (FAB1)	-	-	-	-	-	-	-	3.33	-	-	-	-	-	-	4.39	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Lsat_1_v5_gn_4_167001.1	-	-	-	-	-	-	-	-	-	-	-	-	-	-	4.95	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Lsat_1_v5_gn_4_22560.1	-	3.13	-	-	-	-	-	-	-	-	-	-	-	-	3.95	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	2.76
Lsat_1_v5_gn_4_25441.1 (CYP89A7)	-	-	-	-	-	-	-	-	-	-	-	-	-	-	4.95	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Lsat_1_v5_gn_4_74820.1 (ARO1)	-	-	-	-	-	-	-	-	-	-	-	-	-	-	4.62	-	-	-	-	-	-	-	-	-	-	2.69	-	-	-	-	-
Lsat_1_v5_gn_5_147380.1 (RH37)	-	-	-	-	-	-	-	-	-	-	-	-	-	-	4.95	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Lsat_1_v5_gn_5_184340.1 (NSUN5)	-	-	-	-	-	-	-	-	-	2.48	-	-	-	-	4.67	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Lsat_1_v5_gn_5_186261.1	-	-	-	-	-	-	-	-	-	-	-	-	-	-	4.95	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Lsat_1_v5_gn_5_37800.1	-	-	-	-	-	-	-	-	-	-	-	-	-	3.92	3.99	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Lsat_1_v5_gn_5_41081.1 (LMK1)	-	-	-	-	-	-	1.75	-	-	-	-	-	-	-	3.91	-	-	-	-	-	-	-	-	1.6	3.26	-	-	-	-	-	-
Lsat_1_v5_gn_5_46240.1 (CYP71A21)	-1.64	-0.7	-1.33	-4.28	1.95	1.01	-1.28	-1.63	-1.56	-1.54	-2.55	-2.6	-2.85	0.47	3.24	-0.72	-2.18	2.04	-0.61	-1.55	-1.57	-1.55	-	-2.95	-2.68	-1.47	-1.86	-1.12	1.12	-0.41	-2.97
Lsat_1_v5_gn_5_52601.1 (FLP1)	-	-	-	-	-	-	-	-	-	-	-	-	-	-	4.41	-	-	-	-	-	-	-	-	-	-	-	-	3.29	-	-	-
Lsat_1_v5_gn_6_22401.1 (CYP82G1)	-0.08	-2.0	-2.62	-	1.95	0.34	-2.47	-3.4	-2.26	-3.77	-4.38	-5.25	-1.01	2.49	3.29	-2.4	-2.61	1.54	-0.3	-3.0	-0.98	-1.63	-0.8	-2.22	-1.91	-1.52	-0.77	-0.37	-3.13	-3.32	-5.48
Lsat_1_v5_gn_6_28481.1 (PLP)	-	-	-	-	-	-	-	-	-	-	-	-	-	-	4.95	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Lsat_1_v5_gn_6_68300.1 (AtPMEI10)	-	-	-	1.09	1.55	0.54	-0.67	-	1.49	-	-	-	-	2.89	-0.4	-	-0.58	1.38	2.28	-	-	-	-0.44	0.35	-	-	0.28	-0.66	-	-	-0.09
Lsat_1_v5_gn_6_96981.1	-	-	-	-	-	-	-	-	-	-	-	-	-	-	4.95	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Lsat_1_v5_gn_7_106621.1 (DND2)	-	0.63	-	-	-	-	-0.56	-	-0.82	-0.81	0.39	-0.71	-	3.32	1.06	0.58	-0.89	-	2.4	-0.88	0.07	-	-	1.19	-	0.31	-	-	-	-	0.26
Lsat_1_v5_gn_7_106861.1	-	-	-	-	1.09	1.12	-	-	-	-	-	-	-	3.82	3.08	-	-	2.04	-	-	-	-	-	-	-	-	-	-	-	-	-
Lsat_1_v5_gn_7_18600.1 (PS3)	-0.21	-0.15	-	-	-	-	-	-	-1.66	0.09	-	-	-	3.21	1.41	-	-	2.81	-	-	-	-	3.07	-1.96	-	-	-	-	-	-1.91	-
Lsat_1_v5_gn_8_110641.1 (WOL)	-	-	-	-	-	-	-	-	-	-	-	-	-	-	4.95	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Lsat_1_v5_gn_8_22660.1 (GAS2)	-	-3.13	-	-	1.11	-0.88	-	-	-	-3.49	-	-	-	2.79	3.69	-	-	1.09	0.62	-0.81	-3.63	-	-	-0.58	1.14	-1.61	-1.29	-1.79	-	-3.5	-
Lsat_1_v5_gn_8_25540.1 (MAH1)	-	-	-	-	-	-	-	-	-	-	-	-	-	-	4.95	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Lsat_1_v5_gn_8_4201.1 (SAUR1)	-	-	-	-	-	-	-	-	-	-	-	-	-	-	4.95	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Lsat_1_v5_gn_8_68800.1 (IAN13)	-	-	-	-	-	-	-	-	-	-	-	-	-	-	4.95	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Lsat_1_v5_gn_8_78801.1	-1.57	0.4	-0.73	-	-0.27	-4.61	-2.48	-	-	-2.35	-2.92	-1.66	-0.31	3.11	2.13	-2.32	-1.39	1.22	-2.16	-2.48	-4.83	-2.04	2.37	-1.41	-0.67	-1.67	-3.21	-0.28	-1.26	-0.75	0.25
Lsat_1_v5_gn_8_82740.1	-0.43	-0.22	-1.28	-0.97	0.52	0.38	-0.34	-1.7	-0.37	-1.87	0.4	0.05	-1.51	1.79	0.89	-0.68	-0.99	-0.4	0.36	-0.2	0.41	-0.21	2.01	-0.95	-0.19	-0.76	0.08	-1.67	-0.43	-0.63	-0.81
Lsat_1_v5_gn_9_100781.1 (GLP9)	-2.38	-	-	-	1.06	0.14	-	-	-	-	-	-	-	2.46	2.79	-	-	-0.39	-	-	-	-	3.79	-	-2.77	-	-3.98	-2.12	-2.7	-	-
Lsat_1_v5_gn_9_100801.1 (GLP9)	-2.38	-	-	-	1.06	0.14	-	-	-	-	-	-	-	2.46	2.79	-	-	-0.39	-	-	-	-	3.79	-	-2.77	-	-3.98	-2.12	-2.7	-	-
Lsat_1_v5_gn_9_100901.1 (GLP9)	-2.38	-	-	-	1.06	0.14	-	-	-	-	-	-	-	2.46	2.79	-	-	-0.39	-	-	-	-	3.79	-	-2.77	-	-3.98	-2.12	-2.7	-	-
Lsat_1_v5_gn_9_112160.1	-0.42	-1.14	-0.79	-1.59	0.99	0.5	-1.84	-1.89	-0.65	-0.47	-0.29	-0.59	-0.41	2.55	1.09	-0.77	-0.59	0.8	0.05	-0.72	-0.33	-0.59	0.6	-0.66	0.12	-0.75	-0.34	-0.33	-0.13	-0.84	-1.43
Lsat_1_v5_gn_9_50500.1 (GGT2)	-	-	-	-	-	-	-	-	-	-	-	-	-	-	4.95	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Lsat_1_v5_gn_9_85080.1 (FD)	-	-	-	-	-	1.58	-	-	1.43	-	-	-	-	-	3.92	-	-	-	-	-	-	-	-	-	-	1.55	-	-	0.64	1.49	1.5

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.