Bra006275 (GMII, ATGMII)

Aliases : GMII, ATGMII

Description : class-II alpha-mannosidase II. EC_3.2 glycosylase

Gene families : OG0006662 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa (Bra) PCC: Bra006275
Cluster	Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_17

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	None	Extended
MF	GO:0004559	alpha-mannosidase activity	IEA	Interproscan
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005996	monosaccharide metabolic process	None	Extended
BP	GO:0006013	mannose metabolic process	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0015923	mannosidase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0019318	hexose metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0005524	ATP binding	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0005543	phospholipid binding	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0005789	endoplasmic reticulum membrane	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0008418	protein-N-terminal asparagine amidohydrolase activity	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0016567	protein ubiquitination	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016746	acyltransferase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016755	aminoacyltransferase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016810	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016811	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0030554	adenyl nucleotide binding	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0031090	organelle membrane	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0032446	protein modification by small protein conjugation	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0032553	ribonucleotide binding	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0032555	purine ribonucleotide binding	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0032559	adenyl ribonucleotide binding	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0035091	phosphatidylinositol binding	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0097367	carbohydrate derivative binding	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0140096	catalytic activity, acting on a protein	IEP	Brassica rapa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR015341	Glyco_hydro_38_cen	505	607
IPR000602	Glyco_hydro_38_N	160	499
IPR011682	Glyco_hydro_38_C	765	974

External Links

No external refs found!

Bra006275 (GMII, ATGMII)

Expression Profile

Co-expression Networks

Functional Annotation