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  5. Lsat_1_v5_gn_5_32220.1

Lsat_1_v5_gn_5_32220.1 (DXS3, DXPS3)


Aliases : DXS3, DXPS3

Description : borate transporter *(BOR). EC_2.2 transferase transferring aldehyde or ketonic group. 1-deoxy-D-xylulose 5-phosphate synthase *(DXS)


Gene families : OG0001265 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0001265_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_5_32220.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_127


Type GO Term Name Evidence Source
BP GO:0006820 monoatomic anion transport IEA Interproscan
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0016114 terpenoid biosynthetic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005484 SNAP receptor activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0005507 copper ion binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0015095 magnesium ion transmembrane transporter activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0015693 magnesium ion transport IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0030674 protein-macromolecule adaptor activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0048193 Golgi vesicle transport IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0060090 molecular adaptor activity IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR011531 HCO3_transpt-like_TM_dom 887 1063
IPR011531 HCO3_transpt-like_TM_dom 695 868
IPR011531 HCO3_transpt-like_TM_dom 1140 1230
IPR005475 Transketolase-like_Pyr-bd 381 541
IPR005477 Dxylulose-5-P_synthase 62 346
IPR033248 Transketolase_C 558 642
No external refs found!