1. Home
  2. Species
  3. Lactuca sativa
  4. Sequence
  5. Lsat_1_v5_gn_5_30220.1

Lsat_1_v5_gn_5_30220.1


Description : RAB5 canonical effector *(EREX)


Gene families : OG0001298 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0001298_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_5_30220.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_172


Type GO Term Name Evidence Source
MF GO:0035091 phosphatidylinositol binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0000151 ubiquitin ligase complex IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0000155 phosphorelay sensor kinase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0000375 RNA splicing, via transesterification reactions IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0000398 mRNA splicing, via spliceosome IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004177 aminopeptidase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004190 aspartic-type endopeptidase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004356 glutamine synthetase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004673 protein histidine kinase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004842 ubiquitin-protein transferase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0005215 transporter activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006541 glutamine metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006542 glutamine biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008233 peptidase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008235 metalloexopeptidase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008238 exopeptidase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009064 glutamine family amino acid metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0016020 membrane IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016211 ammonia ligase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016301 kinase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016740 transferase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016755 aminoacyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0019787 ubiquitin-like protein transferase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0022857 transmembrane transporter activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0030145 manganese ion binding IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0032182 ubiquitin-like protein binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0034450 ubiquitin-ubiquitin ligase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0035673 oligopeptide transmembrane transporter activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0042887 amide transmembrane transporter activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0043130 ubiquitin binding IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0046540 U4/U6 x U5 tri-snRNP complex IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0055085 transmembrane transport IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0061630 ubiquitin protein ligase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0070001 aspartic-type peptidase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0070006 metalloaminopeptidase activity IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0097525 spliceosomal snRNP complex IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0097526 spliceosomal tri-snRNP complex IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0120114 Sm-like protein family complex IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0140096 catalytic activity, acting on a protein IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0140299 small molecule sensor activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:1904680 peptide transmembrane transporter activity IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:1990234 transferase complex IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR001683 PX_dom 84 159
No external refs found!