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  5. Lsat_1_v5_gn_5_27740.1

Lsat_1_v5_gn_5_27740.1 (YCF2.2)


Aliases : YCF2.2

Description : regulatory component *(YCF2) of AAA-ATPase motor complex


Gene families : OG0000416 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000416_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_5_27740.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_45

Target Alias Description ECC score Gene Family Method Actions
Lsat_1_v5_gn_9_18701.1 YCF2.2 regulatory component *(YCF2) of AAA-ATPase motor complex 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004559 alpha-mannosidase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0005319 lipid transporter activity IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0005737 cytoplasm IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006869 lipid transport IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0015923 mannosidase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0015924 mannosyl-oligosaccharide mannosidase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016763 pentosyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0061024 membrane organization IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0120009 intermembrane lipid transfer IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0120013 lipid transfer activity IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR008543 Uncharacterised_Ycf2 1 159
No external refs found!