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Description : RNA editing factor *(OTP970)
Gene families : OG0046949 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_5_24421.1 | |
| Cluster | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_161 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003682 | chromatin binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0030118 | clathrin coat | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0030120 | vesicle coat | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0030125 | clathrin vesicle coat | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0030130 | clathrin coat of trans-Golgi network vesicle | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0030132 | clathrin coat of coated pit | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0030247 | polysaccharide binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0044877 | protein-containing complex binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0098797 | plasma membrane protein complex | IEP | Lactuca Sativa GO terms from Neighborhoods |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_rpt | 344 | 391 |
| IPR002885 | Pentatricopeptide_rpt | 652 | 695 |
| IPR002885 | Pentatricopeptide_rpt | 547 | 594 |
| IPR002885 | Pentatricopeptide_rpt | 724 | 749 |
| IPR002885 | Pentatricopeptide_rpt | 244 | 270 |
| IPR002885 | Pentatricopeptide_rpt | 450 | 479 |
| IPR002885 | Pentatricopeptide_rpt | 145 | 167 |
| IPR046848 | E_motif | 766 | 828 |
| No external refs found! |