Lsat_1_v5_gn_5_21300.1 (EIF5A, ELF5A-1,...)

Aliases : EIF5A, ELF5A-1, EIF-5A, ATELF5A-1

Description : poly-P/G elongation factor *(eEF5/eIF5A))

Gene families : OG0001692 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0001692_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_5_21300.1
Cluster	Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_191

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0003746	translation elongation factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006417	regulation of translation	None	Extended
BP	GO:0006448	regulation of translational elongation	None	Extended
BP	GO:0006449	regulation of translational termination	None	Extended
MF	GO:0008135	translation factor activity, RNA binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009891	positive regulation of biosynthetic process	None	Extended
BP	GO:0009893	positive regulation of metabolic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010557	positive regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010604	positive regulation of macromolecule metabolic process	None	Extended
BP	GO:0010608	post-transcriptional regulation of gene expression	None	Extended
BP	GO:0010628	positive regulation of gene expression	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031325	positive regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0031328	positive regulation of cellular biosynthetic process	None	Extended
BP	GO:0034248	regulation of amide metabolic process	None	Extended
BP	GO:0034250	positive regulation of amide metabolic process	None	Extended
MF	GO:0043021	ribonucleoprotein complex binding	None	Extended
MF	GO:0043022	ribosome binding	IEA	Interproscan
BP	GO:0043243	positive regulation of protein-containing complex disassembly	None	Extended
BP	GO:0043244	regulation of protein-containing complex disassembly	None	Extended
MF	GO:0044877	protein-containing complex binding	None	Extended
MF	GO:0045182	translation regulator activity	None	Extended
BP	GO:0045727	positive regulation of translation	None	Extended
BP	GO:0045901	positive regulation of translational elongation	IEA	Interproscan
BP	GO:0045905	positive regulation of translational termination	IEA	Interproscan
BP	GO:0048518	positive regulation of biological process	None	Extended
BP	GO:0048522	positive regulation of cellular process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051128	regulation of cellular component organization	None	Extended
BP	GO:0051130	positive regulation of cellular component organization	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051173	positive regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051246	regulation of protein metabolic process	None	Extended
BP	GO:0051247	positive regulation of protein metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0090079	translation regulator activity, nucleic acid binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000139	Golgi membrane	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0000145	exocyst	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0000375	RNA splicing, via transesterification reactions	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0000377	RNA splicing, via transesterification reactions with bulged adenosine as nucleophile	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0000398	mRNA splicing, via spliceosome	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0003872	6-phosphofructokinase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0004356	glutamine synthetase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0005244	voltage-gated monoatomic ion channel activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0005247	voltage-gated chloride channel activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0005253	monoatomic anion channel activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0005254	chloride channel activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0005338	nucleotide-sugar transmembrane transporter activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0005546	phosphatidylinositol-4,5-bisphosphate binding	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006066	alcohol metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006354	DNA-templated transcription elongation	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006367	transcription initiation at RNA polymerase II promoter	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006368	transcription elongation by RNA polymerase II	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006488	dolichol-linked oligosaccharide biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006490	oligosaccharide-lipid intermediate biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006541	glutamine metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006542	glutamine biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006720	isoprenoid metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006820	monoatomic anion transport	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006821	chloride transport	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006887	exocytosis	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0008023	transcription elongation factor complex	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0008134	transcription factor binding	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0008308	voltage-gated monoatomic anion channel activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0008380	RNA splicing	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0008443	phosphofructokinase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0008509	monoatomic anion transmembrane transporter activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0009064	glutamine family amino acid metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0009084	glutamine family amino acid biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0015103	inorganic anion transmembrane transporter activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0015108	chloride transmembrane transporter activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0015165	pyrimidine nucleotide-sugar transmembrane transporter activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0015698	inorganic anion transport	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0015780	nucleotide-sugar transmembrane transport	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0015931	nucleobase-containing compound transport	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0015932	nucleobase-containing compound transmembrane transporter activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0016070	RNA metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0016093	polyprenol metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0016192	vesicle-mediated transport	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0016197	endosomal transport	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016211	ammonia ligase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0016482	cytosolic transport	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0016570	histone modification	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0016593	Cdc73/Paf1 complex	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016880	acid-ammonia (or amide) ligase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0017025	TBP-class protein binding	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0019200	carbohydrate kinase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0019348	dolichol metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0022832	voltage-gated channel activity	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0030532	small nuclear ribonucleoprotein complex	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0030906	retromer, cargo-selective complex	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0032774	RNA biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0032940	secretion by cell	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0032991	protein-containing complex	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0042147	retrograde transport, endosome to Golgi	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0043687	post-translational protein modification	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0044281	small molecule metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0046540	U4/U6 x U5 tri-snRNP complex	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0046903	secretion	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0090481	pyrimidine nucleotide-sugar transmembrane transport	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0097525	spliceosomal snRNP complex	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0097526	spliceosomal tri-snRNP complex	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0098588	bounding membrane of organelle	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0120114	Sm-like protein family complex	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0140296	general transcription initiation factor binding	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0140352	export from cell	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0140513	nuclear protein-containing complex	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:1901264	carbohydrate derivative transport	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:1901505	carbohydrate derivative transmembrane transporter activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:1901615	organic hydroxy compound metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:1901981	phosphatidylinositol phosphate binding	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:1902936	phosphatidylinositol bisphosphate binding	IEP	Lactuca Sativa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR020189	Transl_elong_IF5A_C	85	154

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Lsat_1_v5_gn_5_21300.1 (EIF5A, ELF5A-1,...)

Expression Profile

Co-expression Networks

Functional Annotation