Lsat_1_v5_gn_5_191480.1 (ABCC4, ATMRP4, MRP4, EST3)

Aliases : ABCC4, ATMRP4, MRP4, EST3

Description : subfamily ABCC transporter

Gene families : OG0003458 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0003458_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_5_191480.1
Cluster	Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_172

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140359	ABC-type transporter activity	IEA	Interproscan
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0006355	regulation of DNA-templated transcription	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006811	monoatomic ion transport	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006812	monoatomic cation transport	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006813	potassium ion transport	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0008171	O-methyltransferase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0008194	UDP-glycosyltransferase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0008324	monoatomic cation transmembrane transporter activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0009889	regulation of biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0010277	chlorophyllide a oxygenase [overall] activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0010468	regulation of gene expression	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0010556	regulation of macromolecule biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0015075	monoatomic ion transmembrane transporter activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0015079	potassium ion transmembrane transporter activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016703	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0018024	obsolete histone lysine N-methyltransferase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0019222	regulation of metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0022890	inorganic cation transmembrane transporter activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0030001	metal ion transport	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0031323	regulation of cellular metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0031326	regulation of cellular biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0046873	metal ion transmembrane transporter activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0046914	transition metal ion binding	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0051171	regulation of nitrogen compound metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0051252	regulation of RNA metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0051537	2 iron, 2 sulfur cluster binding	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0060255	regulation of macromolecule metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0071805	potassium ion transmembrane transport	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0080090	regulation of primary metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:1901702	salt transmembrane transporter activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:2001141	regulation of RNA biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like_ATP-bd	671	804
IPR011527	ABC1_TM_dom	340	604
IPR011527	ABC1_TM_dom	959	1203
IPR003439	ABC_transporter-like_ATP-bd	1293	1440

External Links

No external refs found!

Lsat_1_v5_gn_5_191480.1 (ABCC4, ATMRP4, MRP4, EST3)

Expression Profile

Co-expression Networks

Functional Annotation