Lsat_1_v5_gn_5_179340.1 (PRT1)

Aliases : PRT1

Description : type-II-residues E3 ubiquitin ligase *(PRT1)

Gene families : OG0045366 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_5_179340.1
Cluster	Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_139

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0010035	response to inorganic substance	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0010038	response to metal ion	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0042221	response to chemical	IEP	Lactuca Sativa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR000433	Znf_ZZ	287	328

External Links

No external refs found!