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  5. Lsat_1_v5_gn_5_178821.1

Lsat_1_v5_gn_5_178821.1 (ATATH8)


Aliases : ATATH8

Description : E3 ubiquitin ligase *(PPRT)


Gene families : OG0001009 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0001009_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_5_178821.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_70


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004867 serine-type endopeptidase inhibitor activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0005985 sucrose metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006414 translational elongation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009611 response to wounding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016157 sucrose synthase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0044183 protein folding chaperone IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0140662 ATP-dependent protein folding chaperone IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR019396 TM_Fragile-X-F-assoc 506 539
IPR004147 ABC1_dom 234 491
No external refs found!