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  5. Lsat_1_v5_gn_5_176780.1

Lsat_1_v5_gn_5_176780.1


Description : not classified


Gene families : OG0000166 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000166_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_5_176780.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm):

    • Target Alias Description ECC score Gene Family Method Actions
    Lsat_1_v5_gn_1_85880.1 No alias not classified 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
    Lsat_1_v5_gn_2_129340.1 FRS12 not classified 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

    Type GO Term Name Evidence Source

    No GO annotation available for this sequence
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    Type GO Term Name Evidence Source
    MF GO:0003883 CTP synthase activity IEP Lactuca Sativa GO terms from Neighborhoods
    BP GO:0006220 pyrimidine nucleotide metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
    BP GO:0006221 pyrimidine nucleotide biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
    BP GO:0072527 pyrimidine-containing compound metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
    BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods

    No InterPro domains available for this sequence

    No external refs found!