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  5. Lsat_1_v5_gn_5_171441.1

Lsat_1_v5_gn_5_171441.1 (QED1, OTP81)


Aliases : QED1, OTP81

Description : RNA editing factor *(OTP81)


Gene families : OG0007800 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_5_171441.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_104

Target Alias Description ECC score Gene Family Method Actions
Bra007578 No alias RNA editing factor *(MEF100) 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR046849 Eplus_motif 621 647
IPR002885 Pentatricopeptide_rpt 338 363
IPR002885 Pentatricopeptide_rpt 411 435
IPR002885 Pentatricopeptide_rpt 102 128
IPR002885 Pentatricopeptide_rpt 512 535
IPR002885 Pentatricopeptide_rpt 306 334
IPR002885 Pentatricopeptide_rpt 278 305
IPR032867 DYW_dom 652 745
IPR002885 Pentatricopeptide_rpt 436 484
IPR002885 Pentatricopeptide_rpt 202 248
IPR046848 E_motif 554 616
No external refs found!