Lsat_1_v5_gn_5_165140.1 (MEF10)

Aliases : MEF10

Description : RNA editing factor *(MEF10)

Gene families : OG0046436 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_5_165140.1
Cluster	Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_104

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003678	DNA helicase activity	IEP	Lactuca Sativa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR002885	Pentatricopeptide_rpt	409	434
IPR002885	Pentatricopeptide_rpt	106	126
IPR046849	Eplus_motif	520	540
IPR046848	E_motif	452	513
IPR002885	Pentatricopeptide_rpt	236	281
IPR002885	Pentatricopeptide_rpt	134	179
IPR002885	Pentatricopeptide_rpt	334	381
IPR002885	Pentatricopeptide_rpt	33	77
IPR032867	DYW_dom	556	626

External Links

No external refs found!