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  5. Lsat_1_v5_gn_5_162440.1

Lsat_1_v5_gn_5_162440.1 (DEG9, OXS2, TZF7)


Aliases : DEG9, OXS2, TZF7

Description : regulatory factor *(TZF) of mRNA stress granule formation


Gene families : OG0009055 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_5_162440.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_30


Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004329 formate-tetrahydrofolate ligase activity IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0005575 cellular_component IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0005778 peroxisomal membrane IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006355 regulation of DNA-templated transcription IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006813 potassium ion transport IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0007165 signal transduction IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0008150 biological_process IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0008287 protein serine/threonine phosphatase complex IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009987 cellular process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0015079 potassium ion transmembrane transporter activity IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0016020 membrane IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016307 obsolete phosphatidylinositol phosphate kinase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0016559 peroxisome fission IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0019208 phosphatase regulator activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0019888 protein phosphatase regulator activity IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0031903 microbody membrane IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0042579 microbody IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0043227 membrane-bounded organelle IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0043231 intracellular membrane-bounded organelle IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0048285 organelle fission IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0050789 regulation of biological process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0050794 regulation of cellular process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0051252 regulation of RNA metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0055085 transmembrane transport IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0065007 biological regulation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0071805 potassium ion transmembrane transport IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0098588 bounding membrane of organelle IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0110165 cellular anatomical entity IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:1902494 catalytic complex IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:1903293 phosphatase complex IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:2001141 regulation of RNA biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR002110 Ankyrin_rpt 53 126
IPR000571 Znf_CCCH 261 281
No external refs found!