Lsat_1_v5_gn_5_160501.1

Description : not classified

Gene families : OG0045197 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_5_160501.1
Cluster	Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_117

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005759	mitochondrial matrix	IEA	Interproscan
CC	GO:0031974	membrane-enclosed lumen	None	Extended
CC	GO:0043233	organelle lumen	None	Extended
CC	GO:0070013	intracellular organelle lumen	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003905	alkylbase DNA N-glycosylase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006284	base-excision repair	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0008725	DNA-3-methyladenine glycosylase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0016042	lipid catabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016799	hydrolase activity, hydrolyzing N-glycosyl compounds	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0019104	DNA N-glycosylase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0043733	DNA-3-methylbase glycosylase activity	IEP	Lactuca Sativa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR003428	MAM33	87	197

External Links

No external refs found!