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  5. Lsat_1_v5_gn_5_149940.1

Lsat_1_v5_gn_5_149940.1 (EMB2261, ECD1)


Aliases : EMB2261, ECD1

Description : not classified


Gene families : OG0046547 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_5_149940.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_73


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000213 tRNA-intron endonuclease activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004549 tRNA-specific ribonuclease activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006388 tRNA splicing, via endonucleolytic cleavage and ligation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0008033 tRNA processing IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008270 zinc ion binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0008380 RNA splicing IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016892 RNA endonuclease activity, producing 3'-phosphomonoesters IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0031012 extracellular matrix IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0048364 root development IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0048367 shoot system development IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0048731 system development IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0099402 plant organ development IEP Lactuca Sativa GO terms from Neighborhoods

No InterPro domains available for this sequence

No external refs found!