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  5. Lsat_1_v5_gn_5_149161.1

Lsat_1_v5_gn_5_149161.1 (PIF3, PAP3, POC1)


Aliases : PIF3, PAP3, POC1

Description : bHLH-type transcription factor. regulatory protein *(PIF) of red/far-red light perception


Gene families : OG0046123 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_5_149161.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_117


Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004506 squalene monooxygenase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0005215 transporter activity IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0005575 cellular_component IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0005759 mitochondrial matrix IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0005886 plasma membrane IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006284 base-excision repair IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0015267 channel activity IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0016020 membrane IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0016042 lipid catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0019104 DNA N-glycosylase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0022803 passive transmembrane transporter activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0022857 transmembrane transporter activity IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0031974 membrane-enclosed lumen IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0043233 organelle lumen IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0055085 transmembrane transport IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0070013 intracellular organelle lumen IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0110165 cellular anatomical entity IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR011598 bHLH_dom 88 134
No external refs found!