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  5. Lsat_1_v5_gn_5_146660.1

Lsat_1_v5_gn_5_146660.1 (At-SR30, SR30, ATSRP30)


Aliases : At-SR30, SR30, ATSRP30

Description : RNA splicing factor *(SR30/34)


Gene families : OG0046854 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_5_146660.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_18


Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000381 regulation of alternative mRNA splicing, via spliceosome IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003997 acyl-CoA oxidase activity IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0005777 peroxisome IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006302 double-strand break repair IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006310 DNA recombination IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006635 fatty acid beta-oxidation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009062 fatty acid catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0016042 lipid catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0016054 organic acid catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0019395 fatty acid oxidation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0019915 lipid storage IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0030258 lipid modification IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0034440 lipid oxidation IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0042579 microbody IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0043227 membrane-bounded organelle IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0043231 intracellular membrane-bounded organelle IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0043484 regulation of RNA splicing IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0043687 post-translational protein modification IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0044242 cellular lipid catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0044282 small molecule catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0046395 carboxylic acid catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0048024 regulation of mRNA splicing, via spliceosome IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0050684 regulation of mRNA processing IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0051235 maintenance of location IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0070647 protein modification by small protein conjugation or removal IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0072329 monocarboxylic acid catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:1903311 regulation of mRNA metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR000504 RRM_dom 8 75
IPR000504 RRM_dom 109 172
No external refs found!