Lsat_1_v5_gn_5_128680.1 (RABA1g, AtRABA1g)

Aliases : RABA1g, AtRABA1g

Description : A-class RAB GTPase

Gene families : OG0000470 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000470_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_5_128680.1
Cluster	Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_31

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004176	ATP-dependent peptidase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0004345	glucose-6-phosphate dehydrogenase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0004616	phosphogluconate dehydrogenase (decarboxylating) activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0004743	pyruvate kinase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0005215	transporter activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0005996	monosaccharide metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006006	glucose metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006091	generation of precursor metabolites and energy	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006098	pentose-phosphate shunt	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006720	isoprenoid metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006739	NADP metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006740	NADPH regeneration	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006810	transport	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006835	dicarboxylic acid transport	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0008299	isoprenoid biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0010035	response to inorganic substance	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0010167	response to nitrate	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0015267	channel activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0015698	inorganic anion transport	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0015706	nitrate transmembrane transport	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0015711	organic anion transport	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0015740	C4-dicarboxylate transport	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0015743	malate transport	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0015849	organic acid transport	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016491	oxidoreductase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016717	oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016872	intramolecular lyase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0019318	hexose metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0019362	pyridine nucleotide metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0022803	passive transmembrane transporter activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0022857	transmembrane transporter activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0030955	potassium ion binding	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0031420	alkali metal ion binding	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0044281	small molecule metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0046422	violaxanthin de-epoxidase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0046496	nicotinamide nucleotide metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0046942	carboxylic acid transport	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0050661	NADP binding	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0051156	glucose 6-phosphate metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0051179	localization	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0051234	establishment of localization	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0055085	transmembrane transport	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0072524	pyridine-containing compound metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0098660	inorganic ion transmembrane transport	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0098661	inorganic anion transmembrane transport	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:1901698	response to nitrogen compound	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:1901700	response to oxygen-containing compound	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:1902025	nitrate import	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:1902074	response to salt	IEP	Lactuca Sativa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR001806	Small_GTPase	15	175

External Links

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Lsat_1_v5_gn_5_128680.1 (RABA1g, AtRABA1g)

Expression Profile

Co-expression Networks

Functional Annotation