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Description : RNA editing factor *(ELI1)
Gene families : OG0046265 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_5_128320.1 | |
| Cluster | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_121 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0008270 | zinc ion binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000041 | transition metal ion transport | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0003676 | nucleic acid binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0003677 | DNA binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0003697 | single-stranded DNA binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0003872 | 6-phosphofructokinase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0003887 | DNA-directed DNA polymerase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0004134 | 4-alpha-glucanotransferase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0004527 | exonuclease activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0005375 | copper ion transmembrane transporter activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006096 | glycolytic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006260 | DNA replication | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006825 | copper ion transport | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0008408 | 3'-5' exonuclease activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0008443 | phosphofructokinase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0019200 | carbohydrate kinase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0034061 | DNA polymerase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0035434 | copper ion transmembrane transport | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0046915 | transition metal ion transmembrane transporter activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:2001070 | starch binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR046848 | E_motif | 438 | 500 |
| IPR046849 | Eplus_motif | 505 | 525 |
| IPR032867 | DYW_dom | 536 | 628 |
| IPR002885 | Pentatricopeptide_rpt | 160 | 185 |
| IPR002885 | Pentatricopeptide_rpt | 188 | 214 |
| IPR002885 | Pentatricopeptide_rpt | 317 | 365 |
| IPR002885 | Pentatricopeptide_rpt | 216 | 263 |
| IPR002885 | Pentatricopeptide_rpt | 88 | 135 |
| No external refs found! |