Lsat_1_v5_gn_5_12800.1 (AtSEOR1, SEOR1, SEOb)


Aliases : AtSEOR1, SEOR1, SEOb

Description : not classified


Gene families : OG0045347 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_5_12800.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_95


Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004180 carboxypeptidase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004185 serine-type carboxypeptidase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004420 hydroxymethylglutaryl-CoA reductase (NADPH) activity IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0005856 cytoskeleton IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0005885 Arp2/3 protein complex IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006334 nucleosome assembly IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006820 monoatomic anion transport IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0007015 actin filament organization IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008238 exopeptidase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008374 O-acyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0008612 peptidyl-lysine modification to peptidyl-hypusine IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0015629 actin cytoskeleton IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0015936 coenzyme A metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0016043 cellular component organization IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0032993 protein-DNA complex IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0034314 Arp2/3 complex-mediated actin nucleation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0034728 nucleosome organization IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0045010 actin nucleation IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0070008 serine-type exopeptidase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0071840 cellular component organization or biogenesis IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0097435 supramolecular fiber organization IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR027944 SEO_C 468 698
IPR027942 SEO_N 20 306
No external refs found!