1. Home
  2. Species
  3. Brassica rapa
  4. Sequence
  5. Bra005996

Bra005996 (SLG1)


Aliases : SLG1

Description : RNA editing factor *(SLG1)


Gene families : OG0014673 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra005996
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_18


Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004843 cysteine-type deubiquitinase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006099 tricarboxylic acid cycle IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008270 zinc ion binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016579 protein deubiquitination IEP Brassica rapa GO terms from Neighborhoods
MF GO:0019783 ubiquitin-like protein peptidase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0046912 acyltransferase activity, acyl groups converted into alkyl on transfer IEP Brassica rapa GO terms from Neighborhoods
BP GO:0070646 protein modification by small protein removal IEP Brassica rapa GO terms from Neighborhoods
MF GO:0101005 deubiquitinase activity IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_rpt 124 164
IPR002885 Pentatricopeptide_rpt 569 618
IPR046848 E_motif 687 748
IPR002885 Pentatricopeptide_rpt 203 229
IPR002885 Pentatricopeptide_rpt 232 261
IPR002885 Pentatricopeptide_rpt 473 501
IPR002885 Pentatricopeptide_rpt 441 466
No external refs found!