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  5. Lsat_1_v5_gn_5_105901.1

Lsat_1_v5_gn_5_105901.1


Description : subcluster J phosphatase


Gene families : OG0005529 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0005529_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_5_105901.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_139


Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000339 RNA cap binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0000340 RNA 7-methylguanosine cap binding IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0000813 ESCRT I complex IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003729 mRNA binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003997 acyl-CoA oxidase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004190 aspartic-type endopeptidase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004602 glutathione peroxidase activity IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0005777 peroxisome IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0005789 endoplasmic reticulum membrane IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006367 transcription initiation at RNA polymerase II promoter IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006605 protein targeting IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006612 protein targeting to membrane IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006613 cotranslational protein targeting to membrane IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006635 fatty acid beta-oxidation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006886 intracellular protein transport IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0008104 protein localization IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008312 7S RNA binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009062 fatty acid catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009966 regulation of signal transduction IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0010646 regulation of cell communication IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0015031 protein transport IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0016042 lipid catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0016054 organic acid catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0016073 snRNA metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0016180 snRNA processing IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0016192 vesicle-mediated transport IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0016197 endosomal transport IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0019395 fatty acid oxidation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0023051 regulation of signaling IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0030117 membrane coat IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0030118 clathrin coat IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0030119 AP-type membrane coat adaptor complex IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0030125 clathrin vesicle coat IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0030131 clathrin adaptor complex IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0030132 clathrin coat of coated pit IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0030258 lipid modification IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0031123 RNA 3'-end processing IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0032509 endosome transport via multivesicular body sorting pathway IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0032991 protein-containing complex IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0033036 macromolecule localization IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0034440 lipid oxidation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0034472 snRNA 3'-end processing IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0034477 U6 snRNA 3'-end processing IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0036452 ESCRT complex IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0042579 microbody IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0044242 cellular lipid catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0044282 small molecule catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0045047 protein targeting to ER IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0045048 protein insertion into ER membrane IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0045184 establishment of protein localization IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0046395 carboxylic acid catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0046907 intracellular transport IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0048500 signal recognition particle IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0048583 regulation of response to stimulus IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0051205 protein insertion into membrane IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0051641 cellular localization IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0051649 establishment of localization in cell IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0051668 localization within membrane IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0070001 aspartic-type peptidase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0070727 cellular macromolecule localization IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0070972 protein localization to endoplasmic reticulum IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0071702 organic substance transport IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0071705 nitrogen compound transport IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0071985 multivesicular body sorting pathway IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0072329 monocarboxylic acid catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0072657 protein localization to membrane IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0090150 establishment of protein localization to membrane IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0098796 membrane protein complex IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR004274 FCP1_dom 133 295
IPR000626 Ubiquitin-like_dom 17 71
No external refs found!