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Aliases : ATSYP43, SYP43
Description : Qa-type SYP4-group component of SNARE membrane fusion complex
Gene families : OG0045130 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_5_102260.1 | |
| Cluster | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_144 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000062 | fatty-acyl-CoA binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0000428 | DNA-directed RNA polymerase complex | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0003006 | developmental process involved in reproduction | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0005666 | RNA polymerase III complex | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0005783 | endoplasmic reticulum | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006383 | transcription by RNA polymerase III | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0008289 | lipid binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0009690 | cytokinin metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0009790 | embryo development | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0009793 | embryo development ending in seed dormancy | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0010817 | regulation of hormone levels | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0016645 | oxidoreductase activity, acting on the CH-NH group of donors | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0019139 | cytokinin dehydrogenase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0022414 | reproductive process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0030880 | RNA polymerase complex | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0033218 | amide binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0042445 | hormone metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0050660 | flavin adenine dinucleotide binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0055029 | nuclear DNA-directed RNA polymerase complex | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0061695 | transferase complex, transferring phosphorus-containing groups | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0065008 | regulation of biological quality | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0120227 | acyl-CoA binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:1901567 | fatty acid derivative binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000727 | T_SNARE_dom | 264 | 316 |
| No external refs found! |