Lsat_1_v5_gn_4_99501.1 (ABCG29, AtABCG29, ATPDR1, PDR1)


Aliases : ABCG29, AtABCG29, ATPDR1, PDR1

Description : subfamily ABCG transporter


Gene families : OG0000469 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000469_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_4_99501.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_15


Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0140359 ABC-type transporter activity IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR013525 ABC2_TM 1207 1421
IPR013525 ABC2_TM 525 736
IPR043926 ABCG_dom 1091 1154
IPR043926 ABCG_dom 403 456
IPR003439 ABC_transporter-like_ATP-bd 911 1062
IPR013581 PDR_assoc 741 805
IPR003439 ABC_transporter-like_ATP-bd 188 370
IPR029481 ABC_trans_N 99 163
No external refs found!