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  5. Lsat_1_v5_gn_4_87021.1

Lsat_1_v5_gn_4_87021.1 (CAF1k)


Aliases : CAF1k

Description : deadenylase component *(CAF1) of mRNA deadenylation CCR4-NOT complex


Gene families : OG0009136 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_4_87021.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_117


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004674 protein serine/threonine kinase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004866 endopeptidase inhibitor activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0005488 binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008270 zinc ion binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0030414 peptidase inhibitor activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0043167 ion binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0043169 cation binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0046872 metal ion binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0046914 transition metal ion binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0061134 peptidase regulator activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0061135 endopeptidase regulator activity IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR006941 RNase_CAF1 161 219
IPR006941 RNase_CAF1 15 136
No external refs found!