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  5. Lsat_1_v5_gn_4_85501.1

Lsat_1_v5_gn_4_85501.1


Description : not classified


Gene families : OG0036973 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_4_85501.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_20


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004605 phosphatidate cytidylyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006164 purine nucleotide biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006644 phospholipid metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006650 glycerophospholipid metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006655 phosphatidylglycerol biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0007165 signal transduction IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0008654 phospholipid biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008987 quinolinate synthetase A activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009165 nucleotide biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009435 NAD biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0019359 nicotinamide nucleotide biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0019362 pyridine nucleotide metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0019363 pyridine nucleotide biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0019637 organophosphate metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0019674 NAD metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0032048 cardiolipin metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0032049 cardiolipin biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0035556 intracellular signal transduction IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0045017 glycerolipid biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0046471 phosphatidylglycerol metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0046474 glycerophospholipid biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0046486 glycerolipid metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0046496 nicotinamide nucleotide metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0051536 iron-sulfur cluster binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0051540 metal cluster binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0070567 cytidylyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0072522 purine-containing compound biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0072524 pyridine-containing compound metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0072525 pyridine-containing compound biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0090407 organophosphate biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:1901293 nucleoside phosphate biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_rpt 223 252
IPR002885 Pentatricopeptide_rpt 323 352
IPR002885 Pentatricopeptide_rpt 294 315
IPR002885 Pentatricopeptide_rpt 396 423
IPR002885 Pentatricopeptide_rpt 358 384
IPR002885 Pentatricopeptide_rpt 91 119
IPR002885 Pentatricopeptide_rpt 161 184
IPR002885 Pentatricopeptide_rpt 261 286
IPR046848 E_motif 438 500
IPR002885 Pentatricopeptide_rpt 189 216
No external refs found!