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  5. Lsat_1_v5_gn_4_71121.1

Lsat_1_v5_gn_4_71121.1 (ATSK12, SK12)


Aliases : ATSK12, SK12

Description : not classified


Gene families : OG0003525 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0003525_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_4_71121.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_62


Type GO Term Name Evidence Source
BP GO:0048364 root development IEA Interproscan
BP GO:0048367 shoot system development IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000213 tRNA-intron endonuclease activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0003006 developmental process involved in reproduction IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004549 tRNA-specific ribonuclease activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006388 tRNA splicing, via endonucleolytic cleavage and ligation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006835 dicarboxylic acid transport IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0007275 multicellular organism development IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0008033 tRNA processing IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0008380 RNA splicing IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009790 embryo development IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009793 embryo development ending in seed dormancy IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0015711 organic anion transport IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0015740 C4-dicarboxylate transport IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0015743 malate transport IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0015849 organic acid transport IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016892 RNA endonuclease activity, producing 3'-phosphomonoesters IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0022414 reproductive process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0032501 multicellular organismal process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0046942 carboxylic acid transport IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR004320 BPS1_pln 54 292
No external refs found!