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  5. Lsat_1_v5_gn_4_6581.1

Lsat_1_v5_gn_4_6581.1 (ATRPABC24.3, NRPD5,...)


Aliases : ATRPABC24.3, NRPD5, NRPB5, RPB5A

Description : component *(NRPD5) of RNA polymerase IV complex. component *(NRPC5) of RNA polymerase III complex. component *(NRPB5) of RNA polymerase II complex. component *(NRPA5) of RNA polymerase I complex


Gene families : OG0016930 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_4_6581.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_158


Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEA Interproscan
BP GO:0006351 DNA-templated transcription IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0015291 secondary active transmembrane transporter activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0015297 antiporter activity IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0016459 myosin complex IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR000783 RNA_pol_subH/Rpb5_C 133 205
IPR005571 RNA_pol_Rpb5_N 5 90
No external refs found!