Heatmap: Cluster_158 (Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log₂ transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene	Light: 268 uE m-2 s-1	Light: 202.5 uE m-2 s-1 (Control)	Light: 135 uE m-2 s-1	Light: 67.5 uE m-2 s-1	Photoperiod: L24	Photoperiod: L20D4 (Control)	Photoperiod: L12D12	Photoperiod: L8D16	RBW: 4:1:1 (Control)	RBW: 4:1:0	RBW: 3:1:1	RBW: 3:1:0	Nitrogen: 0%	Nitrogen: 25%	Nitrogen: 50%	Nitrogen: 100% (Control)	Nitrogen: 150%	Phosphorous: 0%	Phosphorous: 25%	Phosphorous: 50%	Phosphorous: 100% (Control)	Phosphorous: 150%	Potassium: 0%	Potassium: 25%	Potassium: 50%	Potassium: 100% (Control)	Potassium: 150%	Temperature: 20°C	Temperature: 25°C (Control)	Temperature: 30°C	Temperature: 35°C
Lsat_1_v5_gn_0_25561.1 (CCoAOMT7)	-	-	-	-	-	-	-0.96	-	-	-	-0.76	-	0.19	-	-	-	-	2.86	-	-	-0.54	-	-0.24	-	-	-	-	-	-	-	4.32
Lsat_1_v5_gn_1_102421.1 (CH42)	-	-	-	-	-	-	-	-	1.44	-	0.48	-	-	-	-	-	0.58	-	-	-	-	-	0.48	0.33	0.35	-	-	-	-	2.37	4.03
Lsat_1_v5_gn_1_118480.1 (STY46)	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	4.95
Lsat_1_v5_gn_1_32841.1 (HSD2)	-0.22	-	-	-	0.56	-0.57	-0.19	-0.55	-0.34	-1.42	-0.35	0.37	-0.35	1.32	-0.18	-1.62	-0.51	-1.37	0.12	-0.85	-0.35	-0.96	-	0.15	-0.62	-0.27	-0.26	-0.47	-0.4	0.47	3.07
Lsat_1_v5_gn_1_65800.1 (DIA)	-	-	-	-	-	-	2.64	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	2.62	4.22
Lsat_1_v5_gn_1_92401.1 (MEE39)	-	-	-	-	-	-	-	-	0.57	-	-	-	-	-	-	-	-	-	-	1.23	-	-	0.89	-	-	-	-	-	-	2.67	4.25
Lsat_1_v5_gn_1_94021.1 (HMR)	-	-	-	-	-	-	1.03	-	-	-	-	0.69	-0.08	-	1.51	-	-	2.88	-	1.93	-	-	-0.19	0.65	-	-	-	-	0.85	-	3.03
Lsat_1_v5_gn_2_117700.1	-	-	-	-	-	-	-	-	-	1.32	-	-	3.0	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	4.36
Lsat_1_v5_gn_2_117941.1 (PUP14)	-	-	-	-	-	-	-	-1.16	-	-	-	-	1.89	-	-0.79	-	-	3.65	-	-0.04	-	-	-	0.08	-0.83	-	-	-	-	-	3.47
Lsat_1_v5_gn_2_132320.1 (CKL2)	-	-	-	-	-	-	-	-	-	-	-	-	-	-	2.11	-	-	3.58	-	0.78	-	-	-	-	-	2.41	-	-	-	-	2.95
Lsat_1_v5_gn_2_136821.1 (ALMT4)	-	-	-	-	-	-	-	-	-	-	1.54	-	-	2.52	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	1.25	4.32
Lsat_1_v5_gn_2_28000.1 (HSP18.2)	-1.66	-0.33	-1.64	-1.69	0.6	-0.96	-1.3	-	-1.11	-	-0.36	-	-2.93	0.4	-0.86	-	-2.08	0.88	-0.27	-	-0.76	-1.48	0.32	-1.47	0.11	-3.01	0.61	-	0.22	1.33	3.55
Lsat_1_v5_gn_2_37301.1 (LST8-1)	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	4.95
Lsat_1_v5_gn_2_43681.1 (CHS)	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	3.73	-	-	-	-	-	-	-	-	-	-	-	-	4.15
Lsat_1_v5_gn_2_76020.1 (E1-OGDH1)	-	-	-	-	-	-	-	-	-	-	-	-	3.46	-	-	-	-	-	3.25	-	-	-	-	-	-	-	-	-	-	-	3.39
Lsat_1_v5_gn_2_98261.1 (FLA11)	-	-	0.27	0.2	-	-	-	-	-	-	-	-	2.63	-	-	-	-	-	-0.18	-	-	-	-	-	-	-	-	-	-	-0.22	4.37
Lsat_1_v5_gn_3_127301.1 (ERF1)	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	2.94	-	-	4.54
Lsat_1_v5_gn_3_129381.1 (PME1)	-	-	-	-	-	-	-	-	-	-	-	-	-	3.13	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	4.48
Lsat_1_v5_gn_3_138281.1 (HPAT1)	-	-	-	-	-	-	-	-	-	-	-	-	-	0.35	1.19	0.14	-	3.71	-	-	-	-	-	-	-	-	0.19	0.7	-	-	3.39
Lsat_1_v5_gn_3_32020.1 (ROXY2)	-	-	-	-	-	-	-	-	-	-	0.08	-	2.69	-	-	-	-	3.57	-	-	-	-	-	-	-	-	-	-	-	-	3.54
Lsat_1_v5_gn_3_38401.1 (RTM2)	-2.02	-0.24	-0.27	-	1.86	-0.81	-	-	-1.25	-0.89	-1.07	-0.52	-3.16	-	-1.46	-1.26	0.18	-3.34	-	-3.37	-1.4	-0.81	-	-0.75	0.37	0.0	-3.14	-2.56	0.9	1.0	3.65
Lsat_1_v5_gn_4_102580.1 (GC5)	-	-	-	-	1.3	-	-	-	-	-	-	-	1.57	-	-	-	-	-	-	-	2.33	-	-	-	-	-	-	-	-	3.19	3.52
Lsat_1_v5_gn_4_108460.1 (DLO2)	-	-	-	-	-	-	-	-	-1.21	0.52	-	-	1.64	-	0.17	-	0.17	3.72	-	-	-	-	-0.9	-1.15	0.48	-	-	-	-	-	3.04
Lsat_1_v5_gn_4_144120.1 (PER64)	-	-	-	-	-0.8	-	-	-	1.19	-	0.64	-	2.53	-	1.96	-	1.29	-	-	-	-	-	0.46	-	-	1.29	-	-	-	-	3.41
Lsat_1_v5_gn_4_175081.1	-	-	-	1.16	-	-0.13	-0.27	-	0.75	1.23	0.76	1.01	0.24	1.56	-1.34	-	-1.35	-	-1.66	-	-1.62	-0.4	-	-	-	-	-	-	-1.48	1.46	3.3
Lsat_1_v5_gn_4_175961.1	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	4.95
Lsat_1_v5_gn_4_24021.1	-	-	-	-	-	-	-	-	-	-	-	0.43	1.35	-	-	-	-	4.24	-	-	-	-	0.27	-	-	-	-	-	-	-	2.82
Lsat_1_v5_gn_4_33720.1	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	3.37	-	4.37
Lsat_1_v5_gn_4_44980.1	-	-	-	-	0.44	-1.45	-	-0.31	-1.71	-	-1.49	0.18	2.33	0.98	1.62	-	-	1.38	0.58	-1.69	-	-	-1.52	0.42	-0.58	-	-	-1.42	0.02	-0.57	2.96
Lsat_1_v5_gn_4_6581.1 (NRPD5)	-	-	-	-	-	-	-	-	-	-	-	-	3.44	-	-	-	2.53	-	-	-	-	-	-	-	-	-	-	-	-	-	3.85
Lsat_1_v5_gn_4_70820.1 (NLP1)	-	1.45	-	-	-	-	-	1.44	-	-	-	-	-	-	2.35	-	-	3.36	-	-	-	-	-	-	-	-	-	-	1.06	-	3.01
Lsat_1_v5_gn_4_77220.1	-	-	-	-	-	-	-	-	-	-	-	-	2.65	-	-	-	-	1.26	-	-	-	-	-	-	-	-	-	-	-	-	4.48
Lsat_1_v5_gn_4_97661.1	-1.72	-0.87	-2.72	-1.78	1.05	-0.28	-1.59	-1.11	0.17	0.03	0.25	-0.76	-0.65	-0.29	-0.35	-0.35	-0.84	-0.42	-1.19	-1.2	-0.64	-0.56	0.61	0.5	-1.24	-0.69	-0.07	0.04	0.35	0.8	2.72
Lsat_1_v5_gn_5_106341.1 (VTL5)	-	-	-	-	-	-	-	1.15	-	-	-	-	0.13	-	-	-	-	3.94	-	-	-	-	-	-	-	-	-	-	-	-	3.63
Lsat_1_v5_gn_5_138500.1 (PBL38)	1.29	-	-	-	-0.05	-	-	-	-	-	-	0.42	0.84	-	0.72	0.14	0.03	-	-	-1.22	-	-	2.16	-	-	-	-1.22	-	-1.02	1.7	3.54
Lsat_1_v5_gn_5_72320.1 (CSLB05)	-	-	-	-	-	-	-	-	-	-	-	-	2.47	-	2.03	-	0.85	3.42	-	-	-	-	-	-	-	-	-	0.88	-	-	2.82
Lsat_1_v5_gn_5_85041.1	-	-	-	-	-	-	-	-	-	-	-	-	2.46	-	-	-	-	4.04	-	-	-	-	-	-	-	-	-	-	-	-	3.18
Lsat_1_v5_gn_6_114780.1	-	2.71	-	1.59	-	-	-	-	-	-	-	-	1.34	-	-	-	-	-	-	1.15	1.1	-	-	-	-	-	-	-	-	2.26	3.28
Lsat_1_v5_gn_7_115281.1	-	-	-	-	-	-	-	-0.36	-	1.69	-	-0.98	1.15	-	-0.42	-1.71	-2.32	0.06	-0.77	-0.73	-2.2	-1.2	1.42	-1.16	-1.24	-0.37	-	-	-	2.21	3.48
Lsat_1_v5_gn_7_28000.1 (ROXY2)	-	-	-	-	-	-	-	-	-	-	-	-	1.91	-	-	-	-	3.67	-	-	-	-	-	-	-	-	-	-	-	-	3.86
Lsat_1_v5_gn_7_40800.1 (OFP8)	-	-	-	-	-	0.56	-	-	-	-	-	1.4	2.76	-0.72	-0.96	-0.94	-0.25	2.76	-	-	-	-	-	-	-	-	0.3	-	-0.17	-	3.13
Lsat_1_v5_gn_7_67421.1 (RBL6)	-	-	-	-	-	-	-	-	-	-	-	-	3.25	-	-	-	-	-	-	-	-	-	0.93	-	-	-	-	-	-	2.55	3.78
Lsat_1_v5_gn_7_71460.1	-	-	-	-	2.51	-	-	-	-	-	-	-	-	-	-	-	-	2.11	-	-	-	-	-	-	-	-	-	-	-	-	4.39
Lsat_1_v5_gn_7_82040.1 (LRX1)	-	-	-	-	-	-	-	-	-	-	-	1.17	2.45	-	-	-	-	-	-	1.18	-	-	-	-	1.23	1.25	-	-	1.33	-	3.79
Lsat_1_v5_gn_7_84360.1	-	-	-	-	-	-	-	-	-	-	-	-	1.48	-	-	-	-	3.1	-	-	-	-	-	-	-	-	-	-	-	2.61	3.76
Lsat_1_v5_gn_8_103401.1 (BZR1)	-	-	-	-	-	-	-	-	-	-	-	-	1.69	-	-	-	-	3.16	-	-	-	-	1.78	-	-	-	-	-	-	-	3.94
Lsat_1_v5_gn_8_150021.1	-	-	-	-	-	-0.98	-1.97	-0.15	-1.03	-	0.18	-	2.16	-1.7	-1.65	-	1.23	2.78	-0.06	-2.08	-0.96	-	1.03	0.62	-0.88	-	-	-1.15	-1.99	1.08	2.25
Lsat_1_v5_gn_8_164701.1 (RAF11)	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	3.33	-	-	-	-	-	-	-	-	-	-	-	-	4.39
Lsat_1_v5_gn_8_5781.1 (CRF1)	-	-	-	-	-	-	-	-	-	-	-	1.31	2.04	0.33	2.14	-	-	3.09	-	-	-	-	-	-	-	-	-	-	0.11	-	3.19
Lsat_1_v5_gn_8_70141.1 (SPL2)	-	-	-	-	-	-	-	-	-0.04	-	2.09	-	2.69	-	-	-	0.25	0.98	-	-0.04	-	-	-	-	-	-	-	-	1.07	1.31	3.41
Lsat_1_v5_gn_8_70980.1 (CAX3)	-3.41	-0.38	-0.91	-0.86	-2.79	-0.49	-2.67	-	-1.68	-0.69	-0.07	-0.71	2.05	-3.68	0.26	-2.68	-0.73	1.47	-0.52	-1.19	-3.88	-3.68	1.48	-2.38	-1.82	-1.49	-2.83	-2.27	-0.77	-0.74	3.34
Lsat_1_v5_gn_9_38580.1 (RBGD1)	-	-	-	-	0.32	-	-	-	-	-	-	-	1.63	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	0.71	3.12	4.03
Lsat_1_v5_gn_9_93701.1 (AGL78)	-	-	-	-	-	-	-	3.06	-	-	-	-	2.96	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	3.89
Lsat_1_v5_gn_9_98881.1	-1.36	-	-	-0.41	-2.74	-2.7	-1.18	-	-2.63	-1.26	-0.61	-1.07	1.04	-1.49	0.38	-	-1.06	2.19	-	-1.29	-2.99	-2.49	1.73	-2.84	-0.54	-1.23	-2.61	-2.74	0.01	0.4	3.43

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.