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  5. Lsat_1_v5_gn_4_63720.1

Lsat_1_v5_gn_4_63720.1 (AtHMP52)


Aliases : AtHMP52

Description : not classified


Gene families : OG0037681 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_4_63720.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_48


Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005216 monoatomic ion channel activity IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0005575 cellular_component IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0005576 extracellular region IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0005618 cell wall IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0005634 nucleus IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006073 obsolete cellular glucan metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0015267 channel activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016758 hexosyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0022803 passive transmembrane transporter activity IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0030312 external encapsulating structure IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0043565 sequence-specific DNA binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0046527 glucosyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0048046 apoplast IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0110165 cellular anatomical entity IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR006121 HMA_dom 171 217
IPR006121 HMA_dom 69 124
No external refs found!