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  5. Lsat_1_v5_gn_4_56041.1

Lsat_1_v5_gn_4_56041.1 (DHDPS2)


Aliases : DHDPS2

Description : EC_4.3 carbon-nitrogen lyase. hydroxy-tetrahydrodihydrodipicolinate synthase


Gene families : OG0015885 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_4_56041.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_29

Target Alias Description ECC score Gene Family Method Actions
Lsat_1_v5_gn_7_19900.1 DHDPS2 EC_4.3 carbon-nitrogen lyase.... 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
MF GO:0016829 lyase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003852 2-isopropylmalate synthase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006457 protein folding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006520 amino acid metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006551 leucine metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0008652 amino acid biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009081 branched-chain amino acid metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009082 branched-chain amino acid biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009098 leucine biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0016053 organic acid biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0044183 protein folding chaperone IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0044283 small molecule biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0046394 carboxylic acid biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0046912 acyltransferase activity, acyl groups converted into alkyl on transfer IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0097159 organic cyclic compound binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0140662 ATP-dependent protein folding chaperone IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:1901363 heterocyclic compound binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:1901605 alpha-amino acid metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:1901607 alpha-amino acid biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR002220 DapA-like 72 344
No external refs found!